rs79477463 chr17:21293482 T>C
- Sequence
tggttgcccctgtgcagctgagca[T/C]ctggcctccccaccggatgttagg
- ASB in cell types
- SU-DHL-2 (anaplastic large cell lymphoma) HT1080 (fibrosarcoma)
- ASB for transcription factors
- ITF2_HUMAN SSRP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ITF2_HUMAN | 3.34 | n/a | 2.00 | 3.87 | Discordant | |||
| SSRP1_HUMAN | 2.79 | n/a | 2.00 | n/a | n/a |
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Motif analysis
