rs79480880 chr20:37850955 T>C
- Sequence
gtcaggggcagattagaaatgaca[T/C]ccgcatgcttatttggagggcttg
- ASB in cell types
- CD34+ hematopoietic stem cells
- ASB for transcription factors
- NRF1_HUMAN TIF1B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | -0.45 | 1.58 | 1.33 | -1.79 | Weak Discordant | |||
| TIF1B_HUMAN | 2.27 | 0.70 | 2.00 | n/a | n/a |
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Motif analysis
