rs79487293 chr12:65511346 C>T

Sequence
ttatgtcgctcactcactccctaa[C/T]agcaagaggactatttgtaaaaat
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney)
ASB for transcription factors
SMCA4_HUMAN SSXT_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN 1.80 0.42 0.021.00 1.00 n/a n/a
SSXT_HUMAN 2.08 -0.49 0.021.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

EMBL-EBI lung function (fvc)

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