rs79492793 chr6:100880886 G>A
- Sequence
taggaatgggcggtattgttgcga[G/A]accccggactcgacctcatgccac
- ASB in cell types
- MCF10A (breast epithelial cells) adult erythroblasts
- ASB for transcription factors
- RBBP5_HUMAN P63_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RBBP5_HUMAN | 2.61 | n/a | 2.50 | n/a | n/a | |||
| P63_HUMAN | -0.37 | 1.69 | 1.25 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Liver, Lung, Minor_Salivary_Gland, Muscle_Skeletal, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid