rs79509573 chr3:159263937 G>A
- Sequence
cctcactatcactagagggcactc[G/A]tgaactacactggaaaatgccagg
- ASB in cell types
- PC9 (lung adenocarcinoma) GM18526 (B – cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.43 | -0.29 | 1.25 | -0.98 | Weak Concordant | |||
| STAG1_HUMAN | 1.69 | -1.39 | 1.00 | n/a | n/a |
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Motif analysis
