rs79514313 chr9:33024934 T>C
- Sequence
acagctcccgctgggtcactgtac[T/C]cgagcccttcccgccctcgcgggc
- ASB in cell types
- 22RV1 (prostate carcinoma) breast tumor
- ASB for transcription factors
- ANDR_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 3.32 | n/a | 2.00 | 0.88 | Weak Discordant | |||
| ESR1_HUMAN | 2.76 | -4.99 | 2.00 | 3.11 | Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Liver, Nerve_Tibial, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood