rs79516284 chr13:24684005 T>C
- Sequence
tgacccgaggggtgggtggggtgc[T/C]gccctgtgctagtccagtgctggc
- ASB in cell types
- esophagus muscularis mucosa MCF7 (Invasive ductal breast carcinoma) Peyer's patch spleen
- ASB for transcription factors
- CTCF_HUMAN ZN444_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.60 | 1.07 | 1.40 | 0.89 | Weak Concordant | |||
| ZN444_HUMAN | n/a | 2.66 | 3.00 | -0.11 | Weak Discordant |
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Motif analysis
