rs79534233 chr1:31935495 C>T
- Sequence
ggagctactgagagagtagtatga[C/T]gtattggaaaaatcaagggcttta
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ATF2_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF2_HUMAN | 2.56 | n/a | 1.00 | 0.77 | Weak Discordant | |||
| IKZF2_HUMAN | 1.68 | -1.21 | 1.00 | n/a | n/a |
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Motif analysis
