rs79561756 chr1:111223049 C>A
- Sequence
cctaccaacaaccacgagagggcg[C/A]cccttccccatgcctctcctgcgg
- ASB in cell types
- neutrophils from periferal blood epidermal keratinocytes CD20+ GM18486 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.56 | 0.77 | 1.34 | -2.98 | Concordant |
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Motif analysis
