rs79575850 chr17:60887817 G>T
- Sequence
tccattaggaccactttctgggag[G/T]atgccatctaaaattgcatcatgc
- ASB in cell types
- K562 (myelogenous leukemia) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ATF3_HUMAN ATF4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | n/a | 1.94 | 2.00 | -4.12 | Discordant | |||
| ATF4_HUMAN | n/a | 1.21 | 2.00 | -3.09 | Discordant |
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Motif analysis
