rs79591093 chr5:178074797 C>T
- Sequence
gagctgtgaacattcacccctaga[C/T]ggtgctgtggggtcggagctccac
- ASB in cell types
- GM19193 (female B-cells Lymphoblastoid Cell Lines) HeLa (cervical adenocarcinoma) BE2C
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | n/a | 4.33 | 1.33 | n/a | n/a | |||
| CTCF_HUMAN | -0.27 | 3.82 | 1.42 | 2.16 | Concordant |
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Motif analysis
