rs79605405 chr22:39300633 C>A

Sequence
gtggcctctgcaaatttccaggga[C/A]gagcattccaagaatcggggagag
ASB in cell types
GM19238 (female B-cells lymphoblastoid cell lines) GM18486 (Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.27 1.87 1.001.8·10-3 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial,  Cells_Cultured_fibroblasts,  Nerve_Tibial,  Thyroid

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