rs7969685 chr12:6937980 C>A
- Sequence
ggtgcggcgcgaggccgagcagcg[C/A]gcgcgcgaagaaaaggagcgcgag
- ASB in cell types
- BEAS-2B (bronchial epithelium) HCT-116 (colon carcinoma) HeLa (cervical adenocarcinoma)
- ASB for transcription factors
- GCR_HUMAN PCF11_HUMAN MED26_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 0.17 | 1.07 | 1.07 | n/a | No Hit | |||
| PCF11_HUMAN | n/a | 1.67 | 3.00 | n/a | n/a | |||
| MED26_HUMAN | -0.59 | 1.99 | 1.00 | n/a | n/a |
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