ADASTRA v6.1.0
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rs7977743
chr12:124927462
T
>
C
Sequence
caagagactgttttaaggtaaacg[T/C]agctttccctaaacactttccaaa
ASB in cell types
HEK293 (embryonic kidney)
T47D (invasive ductal carcinoma)
primary B-CLL cells
ASB for transcription factors
BDP1_HUMAN
GRHL2_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BDP1_HUMAN
-2.06
2.58
1.00
1.7·10
-5
1.00
n/a
n/a
GRHL2_HUMAN
n/a
2.08
1.00
0.03
1.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Cells_Cultured_fibroblasts
,
Skin_Not_Sun_Exposed_Suprapubic
,
Thyroid
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)