rs797907 chr1:53725416 A>T
- Sequence
accctggccaggggagtgagcacc[A/T]gtttccattctgtgactcagcaga
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- SCRT2_HUMAN MAFG_HUMAN ATF3_HUMAN SMCA4_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SCRT2_HUMAN | n/a | 3.17 | 2.00 | 4.09 | Concordant | |||
| MAFG_HUMAN | 3.28 | -3.16 | 1.00 | n/a | No Hit | |||
| ATF3_HUMAN | 2.87 | -0.14 | 1.17 | n/a | No Hit | |||
| SMCA4_HUMAN | 1.86 | -1.09 | 1.00 | n/a | n/a |
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Motif analysis
