rs797979 chr1:86793291 G>T

Sequence
taagcaagaagttttctggccagt[G/T]gttgaaatgacatcatgcttcctc
ASB in cell types
hASC (derived adipocytes)
ASB for transcription factors
PPARG_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PPARG_HUMAN 2.88 n/a 0.011.00 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP suicide attempts in bipolar disorder,  suicide attempts in bipolar disorder (females)
GTEx eQTL Adipose_Subcutaneous,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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