rs798038 chr1:116764736 T>C
- Sequence
agtttcggaatgtcagggttgtag[T/C]cagcggttatagcttgtttcattt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ZN687_HUMAN IKZF1_HUMAN IKZF2_HUMAN RELB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN687_HUMAN | -3.19 | 3.50 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | -0.05 | 1.48 | 1.25 | n/a | n/a | |||
| IKZF2_HUMAN | n/a | 1.65 | 3.00 | n/a | n/a | |||
| RELB_HUMAN | -2.78 | 3.02 | 1.00 | n/a | No Hit | |||
| MTA2_HUMAN | -4.19 | 2.58 | 1.50 | n/a | n/a |
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