rs800552 chr8:115804530 G>T
- Sequence
aaatcctgtaaatccagcaacagt[G/T]agatttctaccaacacataattcc
- ASB in cell types
- LNCaP (prostate carcinoma) LNCaP95 CWR22 (prostate carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN A2NVP9_HUMAN HXB13_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.07 | 1.45 | 1.62 | n/a | No Hit | |||
| FOXA1_HUMAN | -0.13 | 1.70 | 1.70 | n/a | No Hit | |||
| A2NVP9_HUMAN | -2.89 | 2.51 | 1.33 | n/a | n/a | |||
| HXB13_HUMAN | n/a | 3.14 | 3.00 | n/a | No Hit |
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