ADASTRA v6.1.0
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rs8048
chr1:30732949
T
>
C
Sequence
tgactcctttcatggaatccactg[T/C]tatgcagccacactgaccacagag
ASB in cell types
K562 (myelogenous leukemia)
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
PAX2_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PAX2_HUMAN
2.07
-0.79
0.02
1.00
2.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
total cholesterol
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Aorta
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Whole_Blood
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)