rs805770 chr20:5688068 C>T
- Sequence
agtttgcaccttccccttcctgct[C/T]atgcaaggaagtgttgcgcccttc
- ASB in cell types
- THP-1 (acute monocytic leukemia) macrophages form periferal blood fetal bone marrow-derived mononuclear cells
- ASB for transcription factors
- SPI1_HUMAN EP300_HUMAN CEBPA_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 0.72 | 1.59 | 1.90 | 1.20 | Weak Concordant | |||
| EP300_HUMAN | -0.18 | 1.50 | 1.47 | n/a | n/a | |||
| CEBPA_HUMAN | -3.56 | 1.95 | 1.50 | 4.97 | Concordant |
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Motif analysis
