rs805771 chr20:5689748 C>T
- Sequence
aaaccctgagtgtaaacagggttt[C/T]ccttgtcaaggaacggaaattggt
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- NFIL3_HUMAN RARA_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIL3_HUMAN | 1.96 | -2.58 | 1.25 | n/a | No Hit | |||
| RARA_HUMAN | 1.61 | -2.74 | 1.50 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.08 | -0.38 | 1.00 | n/a | No Hit |
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