ADASTRA v6.1.0
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rs808725
chr3:44041696
T
>
C
Sequence
tcagttaaaacctgcaaagggagt[T/C]tcaaatgtgtctgtaaagtttgat
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
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View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line)
1.06
0.40
8.9·10
-4
1.00
1.02
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration (geographic atrophy)
,
ldl cholesterol
,
total cholesterol
,
triglycerides
,
waist hip ratio
GTEx eQTL
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Nerve_Tibial
,
Thyroid
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale