rs8098292 chr18:61636491 G>A

Sequence
ccacccagccccaggcaaacacac[G/A]gtacattttcttctctgagattta
ASB in cell types
22RV1 (prostate carcinoma) epithelial cell of prostate
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN -0.07 2.04 1.001.0·10-5 1.75 1.76 Weak Concordant
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Motif analysis

ANDR_HUMAN Weak Concordant
ANDR_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration,  microalbuminuria,  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Adrenal_Gland,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Lung,  Prostate,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid

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