rs8099071 chr18:23586581 G>C
- Sequence
ctccctggcccgggctggggcgcc[G/C]ccgcgaccccgcttcaaggtcccc
- ASB in cell types
- 22RV1 (prostate carcinoma) SUM159PT (Triple negative breast cancer) primary B-CLL cells breast tumor
- ASB for transcription factors
- ANDR_HUMAN TYY1_HUMAN SMAD3_HUMAN BRD4_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 3.22 | n/a | 2.00 | n/a | No Hit | |||
| TYY1_HUMAN | 2.20 | 0.22 | 2.00 | n/a | No Hit | |||
| SMAD3_HUMAN | 2.15 | -0.49 | 1.50 | n/a | No Hit | |||
| BRD4_HUMAN | 1.69 | 0.49 | 1.50 | n/a | n/a | |||
| ESR1_HUMAN | 2.33 | -4.79 | 2.00 | 1.52 | Weak Discordant |
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Motif analysis
