rs8099953 chr19:13731644 T>G

Sequence
accattgaagagcgagtaaaggct[T/G]ggccacgttctggccccgccccac
ASB in cell types
K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
SPT5H_HUMAN MEIS2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPT5H_HUMAN 0.20 1.69 1.000.02 2.25 n/a n/a
MEIS2_HUMAN n/a 1.22 1.000.03 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts Thyroid

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