rs8100312 chr19:2865763 T>G

Sequence
tgggtgttaatcggactgggctgg[T/G]gcagctaaataataaatatcctcc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ARI1B_HUMAN MTG16_HUMAN NFIC_HUMAN ATF3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ARI1B_HUMAN 1.91 n/a 4.0·10-31.00 2.00 n/a n/a
MTG16_HUMAN 2.75 n/a 0.021.00 4.00 n/a n/a
NFIC_HUMAN 2.74 -5.07 0.041.00 2.00 n/a No Hit
ATF3_HUMAN 1.78 n/a 0.051.00 2.00 n/a No Hit
Items per page:
1 – 4 of 4

Motif analysis

No data available

Genetic associations

GTEx eQTL Muscle_Skeletal Stomach

Download