rs8101944 chr19:295295 C>T
- Sequence
ggggctgggctgcgctctgggccc[C/T]gcgatgcctccgggaggcacggcc
- ASB in cell types
- GM19193 (female B-cells Lymphoblastoid Cell Lines) MCF7 (Invasive ductal breast carcinoma) MCF7L-P(immortalized breast epithelial cell line)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.79 | -0.01 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.67 | 1.24 | 1.54 | 0.22 | Weak Concordant |
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Motif analysis
