rs8106283 chr19:556308 G>T
- Sequence
cacccctccgtctgtgttttcgtg[G/T]ttttttttttttgagacagggtca
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) HepG2 (hepatoblastoma)
- ASB for transcription factors
- GLIS1_HUMAN ATF7_HUMAN REST_HUMAN PBX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GLIS1_HUMAN | -3.82 | 2.42 | 1.50 | n/a | No Hit | |||
| ATF7_HUMAN | n/a | 3.12 | 2.00 | n/a | No Hit | |||
| REST_HUMAN | n/a | 3.22 | 2.00 | n/a | No Hit | |||
| PBX2_HUMAN | n/a | 2.69 | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | -1.04 | 1.99 | 1.17 | n/a | No Hit |
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