rs8108042 chr19:42885051 T>C
- Sequence
ggtccgcttggcaatgggcatctt[T/C]ccagatgctggcattatcgctaga
- ASB in cell types
- THP-1 (acute monocytic leukemia) spleen prostate gland transverse colon
- ASB for transcription factors
- RAD21_HUMAN NFIA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.04 | 0.05 | 1.12 | n/a | n/a | |||
| NFIA_HUMAN | 2.89 | -2.78 | 1.00 | -2.15 | Concordant |
Items per page:
1 – 2 of 2
Motif analysis
Genetic associations
GTEx eQTL Brain_Amygdala, Brain_Hippocampus, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood