rs8108174 chr19:17282721 T>A
- Sequence
ggggctgccgccgcggcctggagc[T/A]gctgctgagccaaggagcggaccc
- ASB in cell types
- WA01 (H1, human embryonic stem cells) GM12878 (female B-cells lymphoblastoid cell line) LUHMES (lund human mesencephalic cells)
- ASB for transcription factors
- E2F6_HUMAN CDK9_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| E2F6_HUMAN | 2.73 | -0.39 | 1.75 | n/a | No Hit | |||
| CDK9_HUMAN | 1.74 | -0.73 | 1.67 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Brain_Anterior_cingulate_cortex_BA24, Brain_Cortex, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Thyroid, Whole_Blood