rs8108198 chr19:55635103 G>A
- Sequence
gttcagcagtgacggcattcttaa[G/A]agtcctgcccaagtgagggacttg
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) GM12878 (female B-cells lymphoblastoid cell line) HepG2 (hepatoblastoma)
- ASB for transcription factors
- EGR1_HUMAN ANDR_HUMAN FOXK2_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EGR1_HUMAN | -0.78 | 2.39 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 2.72 | n/a | 3.00 | n/a | No Hit | |||
| FOXK2_HUMAN | 2.88 | 1.14 | 1.62 | n/a | No Hit |
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