rs8108722 chr19:10236408 T>C
- Sequence
cggggacacacagacacaccgaca[T/C]gcaacttccgcctccctcccactt
- ASB in cell types
- HEK293 (embryonic kidney) K562 (myelogenous leukemia) GM01310 ( Transformed lymphovlasoid cell line ) naive IgD+ B cells
- ASB for transcription factors
- AHR_HUMAN COE1_HUMAN CBP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| AHR_HUMAN | -1.50 | 1.82 | 1.00 | 3.79 | Concordant | |||
| COE1_HUMAN | 1.82 | -3.07 | 1.50 | n/a | No Hit | |||
| CBP_HUMAN | -4.75 | 2.65 | 2.00 | n/a | n/a |
Items per page:
1 – 3 of 3
Motif analysis
