rs8109318 chr19:13122780 G>A
- Sequence
gcctgttaatcccatgaaatgtgc[G/A]aggtctgggagatggtgagaggca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF1_HUMAN PKNX1_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.25 | -1.70 | 1.25 | n/a | n/a | |||
| PKNX1_HUMAN | 2.67 | -2.54 | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | 2.38 | n/a | 1.00 | n/a | n/a |
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