rs8109705 chr19:53333602 G>A
- Sequence
tgggagcgaggttgagagacgcac[G/A]ggtcccaccccggccccgccttct
- ASB in cell types
- HepG2 (hepatoblastoma) K562 (myelogenous leukemia) GM01310 ( Transformed lymphovlasoid cell line )
- ASB for transcription factors
- SP130_HUMAN AHR_HUMAN GABP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP130_HUMAN | 2.96 | -3.10 | 1.00 | n/a | n/a | |||
| AHR_HUMAN | 1.77 | -1.34 | 1.50 | n/a | No Hit | |||
| GABP1_HUMAN | 2.23 | -0.13 | 1.50 | n/a | n/a |
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