rs8111048 chr19:16180971 G>A

Sequence
cttgcagtcttgctctgtcactca[G/A]gctagagtacagtagtgtgacctc
ASB for transcription factors
PKNX1_HUMAN
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Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PKNX1_HUMAN -0.57 2.69 0.940.03 2.50 -0.83 Weak Discordant
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Motif analysis

PKNX1_HUMAN Weak Discordant
PKNX1_HUMAN pic

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Cortex,  Breast_Mammary_Tissue,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Left_Ventricle,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Testis,  Whole_Blood

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