rs8111393 chr19:51272622 T>C
- Sequence
cacagtcacacagctggcaaatgg[T/C]ggcgccagacttaaactcaggcag
- ASB in cell types
- macrophages form periferal blood CTV-1 (Adult T acute lymphoblastic leukemia) CD14+ monocytes A549 (lung carcinoma)
- ASB for transcription factors
- SPI1_HUMAN STAT1_HUMAN TBX21_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.63 | 0.29 | 1.43 | n/a | No Hit | |||
| STAT1_HUMAN | 2.94 | -5.27 | 2.00 | n/a | No Hit | |||
| TBX21_HUMAN | n/a | 2.59 | 1.00 | n/a | No Hit | |||
| CTCF_HUMAN | 2.03 | 0.94 | 1.89 | -1.45 | Weak Concordant | |||
| MAFK_HUMAN | 2.54 | -2.58 | 1.00 | n/a | No Hit |
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Motif analysis
