rs8111642 chr19:2962277 A>G
- Sequence
ctgtagggggtagcagagaccata[A/G]gttcaattcagaacagcccctccc
- ASB in cell types
- HEK293 (embryonic kidney) neutrophils from periferal blood Peyer's patch erythroid progenitors
- ASB for transcription factors
- CTCF_HUMAN ZN629_HUMAN ZBT21_HUMAN FOXP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.80 | 0.55 | 1.33 | n/a | No Hit | |||
| ZN629_HUMAN | 0.69 | n/a | 2.00 | n/a | n/a | |||
| ZBT21_HUMAN | 1.02 | n/a | 2.00 | n/a | n/a | |||
| FOXP1_HUMAN | 2.19 | -1.85 | 1.00 | n/a | No Hit | |||
| FOXK2_HUMAN | 2.38 | -1.98 | 1.50 | n/a | No Hit |
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