rs8113305 chr19:1088018 A>C
- Sequence
gacagacacgctcacgccttaccc[A/C]ggagcacgaagtgggagggcaggg
- ASB in cell types
- macrophages form periferal blood CD14+ monocytes CTV-1 (Adult T acute lymphoblastic leukemia) naive IgD+ B cells
- ASB for transcription factors
- SPI1_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.66 | 0.99 | 1.42 | n/a | No Hit | |||
| STAT1_HUMAN | 2.03 | 0.09 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cerebellum, Cells_Cultured_fibroblasts, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid