rs8118148 chr20:5570851 T>C
- Sequence
aacaaatgaggaagacatgaatta[T/C]agttaaagccaaatttctaaaaag
- ASB in cell types
- macrophages form periferal blood
- ASB for transcription factors
- SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 2.23 | -0.59 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP college completion, fasting insulin, fmri brain tests in schizophrenia, hdl cholesterol change with statins, homa-b, homa-ir
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Brain_Caudate_basal_ganglia, Brain_Hippocampus, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Nerve_Tibial, Testis, Thyroid, Whole_Blood