rs8120550 chr20:49982693 A>G
- Sequence
tcctgccggggtcccacctcgcag[A/G]ggcctcgcttcgctcgacgtcccg
- ASB in cell types
- K562 (myelogenous leukemia) erythroid cells Peyer's patch HuCCT1 (intrahepatic cholangiocarcinoma)
- ASB for transcription factors
- TYY1_HUMAN EP400_HUMAN EGR1_HUMAN RBM25_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | -1.09 | 2.78 | 2.00 | n/a | No Hit | |||
| EP400_HUMAN | 2.79 | n/a | 2.00 | n/a | n/a | |||
| EGR1_HUMAN | 1.63 | -3.31 | 2.00 | n/a | No Hit | |||
| RBM25_HUMAN | -0.29 | 2.26 | 2.00 | n/a | n/a |
Items per page:
1 – 4 of 4