rs812149 chr3:111978894 G>C

Sequence
actagtagaaccaacagtctaaac[G/C]aaagagccacgacgctctgcgcat
ASB in cell types
BEAS-2B (bronchial epithelium) Kelly (neuroblastoma) primary B-CLL cells foreskin keratinocyte
ASB for transcription factors
GCR_HUMAN NRF1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN -0.10 1.39 1.003.6·10-7 1.04 n/a No Hit
NRF1_HUMAN -1.78 2.24 1.000.03 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP microalbuminuria,  urinary albumin-to-creatinine ratio
GTEx eQTL Adrenal_Gland,  Artery_Aorta,  Colon_Transverse,  Esophagus_Mucosa,  Heart_Left_Ventricle,  Lung,  Muscle_Skeletal,  Pancreas,  Pituitary,  Prostate,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Testis,  Whole_Blood

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