rs8121742 chr20:63538211 C>T
- Sequence
ctcctcctgtccagcccgcaggac[C/T]cctgcccccttccagctggcctcc
- ASB in cell types
- K562 (myelogenous leukemia) keratinocytes
- ASB for transcription factors
- SNAI2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | 3.18 | -5.26 | 1.50 | 0.00 | Weak Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Esophagus_Mucosa, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen