rs8126781 chr21:45364493 T>C

Sequence
gatggccggccaaatcacccagcc[T/C]gctttcacgagcgaccgctgagct
ASB in cell types
BEAS-2B (bronchial epithelium) HCASMC (Human coronary artery smooth muscle cells)
ASB for transcription factors
GCR_HUMAN TCF21_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN 0.49 1.23 1.002.2·10-8 1.00 n/a No Hit
TCF21_HUMAN -4.53 2.70 1.003.0·10-3 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP total cholesterol
GTEx eQTL Muscle_Skeletal

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