rs8133052 chr21:36135203 G>A

Sequence
ctccccgctcagccatgtcgtcct[G/A]cagccgcgtggcgctggtgaccgg
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
PRDM4_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PRDM4_HUMAN n/a 3.27 1.000.02 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP height,  obesity with early age of onset (age >2),  schizophrenia
GTEx eQTL Artery_Tibial,  Brain_Anterior_cingulate_cortex_BA24,  Brain_Cerebellar_Hemisphere,  Brain_Cortex,  Brain_Hypothalamus,  Brain_Nucleus_accumbens_basal_ganglia,  Brain_Putamen_basal_ganglia,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Minor_Salivary_Gland,  Nerve_Tibial,  Pituitary,  Prostate,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Testis,  Thyroid,  Vagina,  Whole_Blood

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