rs8134378 chr21:41521831 G>A
- Sequence
gctaatcagatatgagtacctgcc[G/A]taccctttaaagcttttaagacat
- ASB in cell types
- VCaP (prostate carcinoma) CWR22 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN SUMO2_HUMAN ERG_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.29 | -0.54 | 2.10 | -3.64 | Concordant | |||
| FOXA1_HUMAN | 1.38 | -0.44 | 1.55 | n/a | No Hit | |||
| SUMO2_HUMAN | 1.84 | -0.72 | 1.50 | n/a | n/a | |||
| ERG_HUMAN | 2.01 | -1.26 | 1.50 | n/a | No Hit |
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Motif analysis
