rs8141214 chr22:31800195 G>T

Sequence
ctattaagtcctgagtctgttgga[G/T]aaacattattatcctgttccctta
ASB for transcription factors
TF65_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN -3.16 0.66 1.000.04 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP college completion,  hdl cholesterol,  ldl cholesterol,  waist hip ratio
GTEx eQTL Artery_Tibial,  Brain_Anterior_cingulate_cortex_BA24,  Brain_Caudate_basal_ganglia,  Brain_Cortex,  Brain_Frontal_Cortex_BA9,  Brain_Nucleus_accumbens_basal_ganglia,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas,  Pituitary,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Testis,  Thyroid,  Whole_Blood

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