rs8143119 chr22:36331506 G>T
- Sequence
gctcagcaggctgggcccaggagg[G/T]aggaaggggaacctgaccgcaggt
- ASB in cell types
- TMD8 (diffuse large B-cell lymphoma) CTV-1 (Adult T acute lymphoblastic leukemia) CD14+ monocytes monocyte-derived macrophages from peripheral blood
- ASB for transcription factors
- SPI1_HUMAN STAT1_HUMAN ITF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.25 | 1.00 | 1.53 | -1.60 | Weak Concordant | |||
| STAT1_HUMAN | 0.22 | 2.38 | 1.50 | -1.48 | Weak Discordant | |||
| ITF2_HUMAN | 3.33 | -0.32 | 1.75 | n/a | No Hit |
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Motif analysis
