rs816028 chr5:154072442 A>G

Sequence
agaatgaagaaaaccctgaaaccc[A/G]ctgagaccagacaatagtacctgt
ASB in cell types
K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 0.82 -0.00 5.0·10-41.00 2.00
GM12878 (female B-cells lymphoblastoid cell line) 0.44 0.76 0.772.4·10-3 1.11
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Motif analysis

No data available

Genetic associations

GRASP birth weight hdl cholesterol ldl cholesterol refractive error
GTEx eQTL Brain_Frontal_Cortex_BA9 Heart_Atrial_Appendage Muscle_Skeletal Testis Whole_Blood

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