rs816214 chr7:56218534 A>C

Sequence
aactgtttcctgtaacacttccac[A/C]aatagaggatggtggaaatgatgc
ASB in cell types
THP-1 (acute monocytic leukemia)
ASB for transcription factors
SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 2.06 -1.48 7.7·10-51.00 1.67 -0.03 Weak Concordant
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Motif analysis

SPI1_HUMAN Weak Concordant
SPI1_HUMAN pic

Genetic associations

GRASP barnes akathisia rating scale,  coronary artery disease (cad),  microalbuminuria
GTEx eQTL Adipose_Subcutaneous,  Adrenal_Gland,  Artery_Aorta,  Artery_Tibial,  Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Cells_EBV-transformed_lymphocytes,  Colon_Transverse,  Esophagus_Mucosa,  Esophagus_Muscularis,  Lung,  Nerve_Tibial,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Testis,  Thyroid,  Whole_Blood

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