rs817385 chr20:63909995 T>C
- Sequence
aaggttttctggaatatttttggt[T/C]gtagtaacgattctgctttaggag
- ASB in cell types
- GM18486 (Lymphoblastoid Cell Lines) GM18505 (female B-cells Lymphoblastoid Cell Lines) GM02610 (Lymphoblastoid Cell Lines) foreskin keratinocyte
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.72 | 0.24 | 1.18 | n/a | n/a | |||
| CTCF_HUMAN | 1.24 | 0.67 | 1.61 | n/a | No Hit |
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